You can run this utility independently if you did not enter the configuration information when you upgraded Management and Security Server.
The Configuration Upgrade Utility (CUU):
enables the services for this Administrative Server.
copies the servlet runner’s keystore from the previous location to the new location, if necessary.
copies the MSSData directory from the previous default location to the new default MSSData location (unless a custom location was configured).
updates port values in configuration and HTML file.
(if installed) copies Security Proxy Server configuration files from the old install directory to the new install directory.